CDS

Accession Number TCMCG007C44062
gbkey CDS
Protein Id XP_009104362.1
Location complement(join(19413602..19413943,19414033..19414098,19414186..19414251,19414335..19414448,19414540..19414710,19414795..19415019))
Gene LOC103830338
GeneID 103830338
Organism Brassica rapa

Protein

Length 327aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009106114.3
Definition transcription factor PIF6 isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description phytochrome interacting factor 3-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K12126        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
ko04712        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGTTTGTTCTTACCAAGCTGATTTATTGTTCTTGCAGGTTAAAAGATCAAGAGTATATGGAGCTTGTGTTTGAGAATGGGCAGTTTCTTGCAAAGAGCCAAAGATCCAAGGCCTTTTCTCTGGAGAATCAACGTACCAAGTCGATCGTGGATTTGTACGAGGACGAGTATAACGAGGATTTCATGAAGAGTATTATTCATGGTGCTGATAAGAAGCTACAGAGTTTGAAAGCTTCTTCATCAAAGAAGATGGTGGTTGATTATGAGAACCGAAAGGACAACGAGTTCATACCACCTGATGAGCAATCTGTGGTTGCTGAAAGGTCGGTTGAATTGGGGTTTGACTCTACAGAATTTACTGAAGATAGTGAAGGGTCGACGTATCTAAGCAGTAGTCTAGATGATGAGTCAGATGATCCGAGGCCACGAGTCCCTGCAAGAACAAGAAAATCTTTGGTCAAGAGAAGACGGAGCAACAGCAACGAGCTTTATAACTCATCTGAAAAAAATCAAAGAAGCGATATCAACAAGAAAATGCGCAAGTTACAGAATCTACTACCTAACTCTGGCAAGGACGATAACGAATCAACGTTGGATGAAGCAATTAACTATATGACGACCCTTCAACTTCAAGTTCAGATGATGACGATGAGTAACAGATTTGCTGCACCAGCAATGATGTTGCCTTTGGGTCCGCATTACTCTCAGATGGGTCTACCAACATGTATGCAAATGGGCCTACCACAGTTTCTGCCTCCGCCTGTTCTAGGATCTGGTGGTAACTCAGCAGATATGCTAAGGTTTCTTAACCATCCCACTGGACTAATAACGCCAATGCAAAACTCTGCATTGTTCACACCAATGGGAAACTATTTCCCTCCGTCATGTGCTGCTTTCCCTAACCAAATACAAAACTCCACCTCCTTGTCGAATCTAGATGACGCAACAACAGATGGAGGATCTCTCTCCGGTAAGAAATAG
Protein:  
MMFVLTKLIYCSCRLKDQEYMELVFENGQFLAKSQRSKAFSLENQRTKSIVDLYEDEYNEDFMKSIIHGADKKLQSLKASSSKKMVVDYENRKDNEFIPPDEQSVVAERSVELGFDSTEFTEDSEGSTYLSSSLDDESDDPRPRVPARTRKSLVKRRRSNSNELYNSSEKNQRSDINKKMRKLQNLLPNSGKDDNESTLDEAINYMTTLQLQVQMMTMSNRFAAPAMMLPLGPHYSQMGLPTCMQMGLPQFLPPPVLGSGGNSADMLRFLNHPTGLITPMQNSALFTPMGNYFPPSCAAFPNQIQNSTSLSNLDDATTDGGSLSGKK